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I am an assistant professor leading the Biodiversity Lab at Uppsala University. Working with eDNA,biodiversity,machine learning,bioinformatics,remote sensing.
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Department of Organismal Biology
Data Scientist
June 19, 2026 – Present
paleovegetation
April 26, 2022 – June 1, 2022
Code and data related to the reconstruction of paleovegetation using BNNs
View ProjectIUCNN
September 7, 2020 – Present
Train neural networks based on geographic species occurrences, environmental data and existing IUCN Red List assessments to predict the conservation status of "Not Evaluated" species, for any taxon or geographic region of interest. https://iucnn.github.io/IUCNN/
View Projectpython_for_biologists
May 27, 2020 – May 29, 2020
Here you can find all tutorials and materials for the GGBC python for biologists course
View Projectiucn_extinction_simulator
October 28, 2019 – June 21, 2023
A program for estimating extinction probability and date for a given set of species, based on IUCN threat assessments
View Projectsnp_extraction_from_alignments
March 12, 2018 – November 18, 2021
This repository contains tools for the extraction of Single Nucleotide Polymorphisms (SNPs) from multiple sequence alignments.
View Projectgbg-python-user-group
June 22, 2015 – November 29, 2017
A place to share code and information within the python user group
View ProjectPyRate
July 8, 2014 – Present
PyRate is a program to estimate speciation, extinction, and preservation rates from fossil occurrence data using a Bayesian framework.
View ProjectCultural Fit Analysis
The candidate's projects are heavily focused on academic and research-oriented biological/environmental data science. While highly technical, the breadth of application outside this specific domain is not evident, which might impact cultural fit in a more general industry setting. The single listed current role as 'Data Scientist' in an academic department aligns with the project focus.
Soft Skills & Operational Fit
Insufficient data to assess soft skills or operational fit. The candidate's projects suggest a strong independent research and development capability.